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Peptide record

TPDB08387

Antibacterial Antifungal standard
17 amino acids
Basic Information
3D PDB MODEL
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TPDB08387
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 dbAMP DRAMP Peptipedia Antifungipept CAFPdb
standard
No
A 17-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, dbAMP, DRAMP, and other sources, with an available 3D structural model.
Sequence
GIINTLQKYYSRVRGGR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C87H145N29O24
ADCEHMFPW
RG
1981.29
11.35
4
0
6
+4
2.77
-0.747
85.88
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
2980
1.50
6
Residue Composition
number
0
A
3
R
1
N
0
D
0
C
0
E
1
Q
3
G
0
H
2
I
1
L
1
K
0
M
0
F
0
P
1
S
1
T
0
W
2
Y
1
V
Amino Acid Distribution
A: 0 R: 3 N: 1 D: 0 C: 0 E: 0 Q: 1 G: 3 H: 0 I: 2 L: 1 K: 1 M: 0 F: 0 P: 0 S: 1 T: 1 W: 0 Y: 2 V: 1
Chemical Descriptors
17 reviewed residue count
C87H145N29O24 sequence-only estimate (linear, free termini)
1981.29 sequence-only estimate (linear, free termini)
11.35 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
2.77 sequence-only estimate (linear, free termini)
-0.747 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept