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Peptide record

TPDB08378

Antibacterial standard
16 amino acids
Basic Information
3D PDB MODEL
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TPDB08378
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 16-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
ATAILRKATRRLVQLI
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C81H151N27O20
NDCEGHMFPSWY
ARL
1823.26
12.71
4
0
9
+4
1.68
0.481
158.75
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
3
Residue Composition
number
3
A
3
R
0
N
0
D
0
C
0
E
1
Q
0
G
0
H
2
I
3
L
1
K
0
M
0
F
0
P
0
S
2
T
0
W
0
Y
1
V
Amino Acid Distribution
A: 3 R: 3 N: 0 D: 0 C: 0 E: 0 Q: 1 G: 0 H: 0 I: 2 L: 3 K: 1 M: 0 F: 0 P: 0 S: 0 T: 2 W: 0 Y: 0 V: 1
Chemical Descriptors
16 reviewed residue count
C81H151N27O20 sequence-only estimate (linear, free termini)
1823.26 sequence-only estimate (linear, free termini)
12.71 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
1.68 sequence-only estimate (linear, free termini)
0.481 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA