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Peptide record

TPDB08374

Antibacterial standard
16 amino acids
Basic Information
3D PDB MODEL
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TPDB08374
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 16-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
CKLRFRGPGRIKVRLC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C83H148N30O17S2
ANDEQHMSTWY
R
1902.40
11.96
6
0
5
+6
2.78
-0.256
91.25
Mammalian: 1.2 hour Yeast: >20 hour E.coli: >10 hour
125
0.07
2
Residue Composition
number
0
A
4
R
0
N
0
D
2
C
0
E
0
Q
2
G
0
H
1
I
2
L
2
K
0
M
1
F
1
P
0
S
0
T
0
W
0
Y
1
V
Amino Acid Distribution
A: 0 R: 4 N: 0 D: 0 C: 2 E: 0 Q: 0 G: 2 H: 0 I: 1 L: 2 K: 2 M: 0 F: 1 P: 1 S: 0 T: 0 W: 0 Y: 0 V: 1
Chemical Descriptors
16 reviewed residue count
C83H148N30O17S2 sequence-only estimate (linear, free termini)
1902.40 sequence-only estimate (linear, free termini)
11.96 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
2.78 sequence-only estimate (linear, free termini)
-0.256 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA