Back to search

Peptide record

TPDB08311

Antibacterial Antifungal Toxicity standard
16 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB08311
Antibacterial Antifungal Toxicity
Anti-infective peptides Toxicity and safety peptides
AntiBP3 Peptipedia CAFPdb dbAMP
standard
No
A 16-aa standard-residue multi-activity (Antibacterial, Antifungal, and Toxicity) peptide sequence curated from AntiBP3, Peptipedia, CAFPdb, and other sources, with an available 3D structural model.
Sequence
VVKFSYRKGSPAPQKN
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C82H132N24O22
DCEHILMTW
K
1806.10
10.91
4
0
5
+4
2.30
-1.044
42.50
Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour
1490
0.82
5
Residue Composition
number
1
A
1
R
1
N
0
D
0
C
0
E
1
Q
1
G
0
H
0
I
0
L
3
K
0
M
1
F
2
P
2
S
0
T
0
W
1
Y
2
V
Amino Acid Distribution
A: 1 R: 1 N: 1 D: 0 C: 0 E: 0 Q: 1 G: 1 H: 0 I: 0 L: 0 K: 3 M: 0 F: 1 P: 2 S: 2 T: 0 W: 0 Y: 1 V: 2
Chemical Descriptors
16 reviewed residue count
C82H132N24O22 sequence-only estimate (linear, free termini)
1806.10 sequence-only estimate (linear, free termini)
10.91 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
2.30 sequence-only estimate (linear, free termini)
-1.044 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb