Back to search

Peptide record

TPDB08282

Antibacterial standard
16 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB08282
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 16-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
EVEPSDTIENVKAKIQ
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C77H130N20O29
RCGHLMFWY
E
1800.00
4.16
2
4
5
-2
2.42
-0.794
91.25
Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour
0
0.00
4
Residue Composition
number
1
A
0
R
1
N
1
D
0
C
3
E
1
Q
0
G
0
H
2
I
0
L
2
K
0
M
0
F
1
P
1
S
1
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 1 R: 0 N: 1 D: 1 C: 0 E: 3 Q: 1 G: 0 H: 0 I: 2 L: 0 K: 2 M: 0 F: 0 P: 1 S: 1 T: 1 W: 0 Y: 0 V: 2
Chemical Descriptors
16 reviewed residue count
C77H130N20O29 sequence-only estimate (linear, free termini)
1800.00 sequence-only estimate (linear, free termini)
4.16 sequence-only estimate (linear, free termini)
-2 sequence-only estimate (linear, free termini)
2.42 sequence-only estimate (linear, free termini)
-0.794 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA