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Peptide record

TPDB08241

Antibacterial standard
16 amino acids
Basic Information
3D PDB MODEL
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TPDB08241
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 16-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
GFRTAHVDLVCPDNPD
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C75H114N22O25S1
EQIKMSWY
D
1755.92
4.16
2
3
5
-2
2.18
-0.419
66.88
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
3
Residue Composition
number
1
A
1
R
1
N
3
D
1
C
0
E
0
Q
1
G
1
H
0
I
1
L
0
K
0
M
1
F
2
P
0
S
1
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 1 R: 1 N: 1 D: 3 C: 1 E: 0 Q: 0 G: 1 H: 1 I: 0 L: 1 K: 0 M: 0 F: 1 P: 2 S: 0 T: 1 W: 0 Y: 0 V: 2
Chemical Descriptors
16 reviewed residue count
C75H114N22O25S1 sequence-only estimate (linear, free termini)
1755.92 sequence-only estimate (linear, free termini)
4.16 sequence-only estimate (linear, free termini)
-2 sequence-only estimate (linear, free termini)
2.18 sequence-only estimate (linear, free termini)
-0.419 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA