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Peptide record

TPDB08083

Antibacterial standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB08083
Antibacterial
Anti-infective peptides
AntiBP3
standard
No
A 15-aa standard-residue antibacterial peptide sequence curated from AntiBP3, with an available 3D structural model.
Sequence
KKCRRWQWRMKKLGA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C88H147N31O17S2
NDEHIFPSTYV
K
1975.45
12.16
7
0
5
+7
3.77
-1.653
32.67
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
11000
5.57
2
Residue Composition
number
1
A
3
R
0
N
0
D
1
C
0
E
1
Q
1
G
0
H
0
I
1
L
4
K
1
M
0
F
0
P
0
S
0
T
2
W
0
Y
0
V
Amino Acid Distribution
A: 1 R: 3 N: 0 D: 0 C: 1 E: 0 Q: 1 G: 1 H: 0 I: 0 L: 1 K: 4 M: 1 F: 0 P: 0 S: 0 T: 0 W: 2 Y: 0 V: 0
Chemical Descriptors
15 reviewed residue count
C88H147N31O17S2 sequence-only estimate (linear, free termini)
1975.45 sequence-only estimate (linear, free termini)
12.16 sequence-only estimate (linear, free termini)
+7 sequence-only estimate (linear, free termini)
3.77 sequence-only estimate (linear, free termini)
-1.653 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA