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Peptide record

TPDB08081

Antibacterial standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB08081
Antibacterial
Anti-infective peptides
AntiBP3 dbAMP DRAMP Peptipedia
standard
No
A 15-aa standard-residue antibacterial peptide sequence curated from AntiBP3, dbAMP, DRAMP, and other sources, with an available 3D structural model.
Sequence
LSSALSALSSALSSK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C60H108N16O23
RNDCEQGHIMFPTWYV
S
1421.61
10.10
1
0
7
+1
0.28
0.740
124.00
Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min
0
0.00
7
Residue Composition
number
3
A
0
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
0
I
4
L
1
K
0
M
0
F
0
P
7
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 3 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 0 L: 4 K: 1 M: 0 F: 0 P: 0 S: 7 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
15 reviewed residue count
C60H108N16O23 sequence-only estimate (linear, free termini)
1421.61 sequence-only estimate (linear, free termini)
10.10 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
0.28 sequence-only estimate (linear, free termini)
0.740 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.