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Peptide record

TPDB07973

Antibacterial standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB07973
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 15-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
DVSIEDKVISLKGDK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C71H124N18O26
ARNCQHMFPTWY
DK
1645.87
4.45
3
4
5
-1
2.18
-0.433
116.67
Mammalian: 1.1 hour Yeast: 3 min E.coli: >10 hour
0
0.00
2
Residue Composition
number
0
A
0
R
0
N
3
D
0
C
1
E
0
Q
1
G
0
H
2
I
1
L
3
K
0
M
0
F
0
P
2
S
0
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 3 C: 0 E: 1 Q: 0 G: 1 H: 0 I: 2 L: 1 K: 3 M: 0 F: 0 P: 0 S: 2 T: 0 W: 0 Y: 0 V: 2
Chemical Descriptors
15 reviewed residue count
C71H124N18O26 sequence-only estimate (linear, free termini)
1645.87 sequence-only estimate (linear, free termini)
4.45 sequence-only estimate (linear, free termini)
-1 sequence-only estimate (linear, free termini)
2.18 sequence-only estimate (linear, free termini)
-0.433 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA