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Peptide record

TPDB07967

Antibacterial standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB07967
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 15-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
DEKIYLKKVADKDQK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C81H137N21O26
RNCGHMFPSTW
K
1821.10
9.47
5
4
5
+1
3.38
-1.600
78.00
Mammalian: 1.1 hour Yeast: 3 min E.coli: >10 hour
1490
0.82
2
Residue Composition
number
1
A
0
R
0
N
3
D
0
C
1
E
1
Q
0
G
0
H
1
I
1
L
5
K
0
M
0
F
0
P
0
S
0
T
0
W
1
Y
1
V
Amino Acid Distribution
A: 1 R: 0 N: 0 D: 3 C: 0 E: 1 Q: 1 G: 0 H: 0 I: 1 L: 1 K: 5 M: 0 F: 0 P: 0 S: 0 T: 0 W: 0 Y: 1 V: 1
Chemical Descriptors
15 reviewed residue count
C81H137N21O26 sequence-only estimate (linear, free termini)
1821.10 sequence-only estimate (linear, free termini)
9.47 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
3.38 sequence-only estimate (linear, free termini)
-1.600 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA