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Peptide record

TPDB07957

Antibacterial standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB07957
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 15-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
KAMKPWIQPKTKVIP
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C84H141N21O18S1
RNDCEGHLFSY
K
1765.23
11.00
4
0
6
+4
0.66
-0.573
78.00
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
5500
3.12
2
Residue Composition
number
1
A
0
R
0
N
0
D
0
C
0
E
1
Q
0
G
0
H
2
I
0
L
4
K
1
M
0
F
3
P
0
S
1
T
1
W
0
Y
1
V
Amino Acid Distribution
A: 1 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 1 G: 0 H: 0 I: 2 L: 0 K: 4 M: 1 F: 0 P: 3 S: 0 T: 1 W: 1 Y: 0 V: 1
Chemical Descriptors
15 reviewed residue count
C84H141N21O18S1 sequence-only estimate (linear, free termini)
1765.23 sequence-only estimate (linear, free termini)
11.00 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
0.66 sequence-only estimate (linear, free termini)
-0.573 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA