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Peptide record

TPDB07953

Antibacterial standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB07953
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 15-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
GVARIRDLLIIESRI
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C76H138N24O21
NCQHKMFPTWY
I
1724.08
10.80
3
2
8
+1
1.83
0.660
182.00
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
1
Residue Composition
number
1
A
3
R
0
N
1
D
0
C
1
E
0
Q
1
G
0
H
4
I
2
L
0
K
0
M
0
F
0
P
1
S
0
T
0
W
0
Y
1
V
Amino Acid Distribution
A: 1 R: 3 N: 0 D: 1 C: 0 E: 1 Q: 0 G: 1 H: 0 I: 4 L: 2 K: 0 M: 0 F: 0 P: 0 S: 1 T: 0 W: 0 Y: 0 V: 1
Chemical Descriptors
15 reviewed residue count
C76H138N24O21 sequence-only estimate (linear, free termini)
1724.08 sequence-only estimate (linear, free termini)
10.80 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
1.83 sequence-only estimate (linear, free termini)
0.660 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA