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Peptide record

TPDB07952

Antibacterial standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB07952
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 15-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
GSHLVEKLYLVKERK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C82H139N23O22
ANDCQIMFPTW
LK
1799.15
10.06
5
2
6
+2
1.97
-0.607
116.67
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
1490
0.83
2
Residue Composition
number
0
A
1
R
0
N
0
D
0
C
2
E
0
Q
1
G
1
H
0
I
3
L
3
K
0
M
0
F
0
P
1
S
0
T
0
W
1
Y
2
V
Amino Acid Distribution
A: 0 R: 1 N: 0 D: 0 C: 0 E: 2 Q: 0 G: 1 H: 1 I: 0 L: 3 K: 3 M: 0 F: 0 P: 0 S: 1 T: 0 W: 0 Y: 1 V: 2
Chemical Descriptors
15 reviewed residue count
C82H139N23O22 sequence-only estimate (linear, free termini)
1799.15 sequence-only estimate (linear, free termini)
10.06 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
1.97 sequence-only estimate (linear, free termini)
-0.607 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA