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Peptide record

TPDB07945

Antibacterial standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB07945
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 15-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
GKAPKLKIFDTKNLK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C79H137N21O20
RCEQHMSWYV
K
1701.09
10.71
5
1
5
+4
1.68
-0.833
84.67
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
2
Residue Composition
number
1
A
0
R
1
N
1
D
0
C
0
E
0
Q
1
G
0
H
1
I
2
L
5
K
0
M
1
F
1
P
0
S
1
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 1 R: 0 N: 1 D: 1 C: 0 E: 0 Q: 0 G: 1 H: 0 I: 1 L: 2 K: 5 M: 0 F: 1 P: 1 S: 0 T: 1 W: 0 Y: 0 V: 0
Chemical Descriptors
15 reviewed residue count
C79H137N21O20 sequence-only estimate (linear, free termini)
1701.09 sequence-only estimate (linear, free termini)
10.71 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
1.68 sequence-only estimate (linear, free termini)
-0.833 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA