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Peptide record

TPDB07928

Antibacterial standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB07928
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 15-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
LVRVRRGFGCPFDER
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C79H127N27O20S1
ANQHIKMSTWY
R
1807.11
10.74
4
2
5
+2
3.54
-0.473
64.67
Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min
0
0.00
1
Residue Composition
number
0
A
4
R
0
N
1
D
1
C
1
E
0
Q
2
G
0
H
0
I
1
L
0
K
0
M
2
F
1
P
0
S
0
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 0 R: 4 N: 0 D: 1 C: 1 E: 1 Q: 0 G: 2 H: 0 I: 0 L: 1 K: 0 M: 0 F: 2 P: 1 S: 0 T: 0 W: 0 Y: 0 V: 2
Chemical Descriptors
15 reviewed residue count
C79H127N27O20S1 sequence-only estimate (linear, free termini)
1807.11 sequence-only estimate (linear, free termini)
10.74 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
3.54 sequence-only estimate (linear, free termini)
-0.473 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA