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Peptide record

TPDB07904

Antibacterial standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB07904
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 15-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
YYGALHNTAHIVLGR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C77H117N23O20
DCEQKMFPSW
AGHLY
1684.92
9.63
3
0
8
+1
0.63
0.093
110.67
Mammalian: 2.8 hour Yeast: 10 min E.coli: 2 min
2980
1.77
4
Residue Composition
number
2
A
1
R
1
N
0
D
0
C
0
E
0
Q
2
G
2
H
1
I
2
L
0
K
0
M
0
F
0
P
0
S
1
T
0
W
2
Y
1
V
Amino Acid Distribution
A: 2 R: 1 N: 1 D: 0 C: 0 E: 0 Q: 0 G: 2 H: 2 I: 1 L: 2 K: 0 M: 0 F: 0 P: 0 S: 0 T: 1 W: 0 Y: 2 V: 1
Chemical Descriptors
15 reviewed residue count
C77H117N23O20 sequence-only estimate (linear, free termini)
1684.92 sequence-only estimate (linear, free termini)
9.63 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
0.63 sequence-only estimate (linear, free termini)
0.093 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA