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Peptide record

TPDB07895

Antibacterial standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB07895
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 15-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
WIQPKTKVIPWWWWW
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C114H146N24O18
ARNDCEGHLMFSY
W
2140.56
10.60
2
0
9
+2
-0.58
-0.493
71.33
Mammalian: 2.8 hour Yeast: 3 min E.coli: 2 min
33000
15.42
2
Residue Composition
number
0
A
0
R
0
N
0
D
0
C
0
E
1
Q
0
G
0
H
2
I
0
L
2
K
0
M
0
F
2
P
0
S
1
T
6
W
0
Y
1
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 1 G: 0 H: 0 I: 2 L: 0 K: 2 M: 0 F: 0 P: 2 S: 0 T: 1 W: 6 Y: 0 V: 1
Chemical Descriptors
15 reviewed residue count
C114H146N24O18 sequence-only estimate (linear, free termini)
2140.56 sequence-only estimate (linear, free termini)
10.60 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
-0.58 sequence-only estimate (linear, free termini)
-0.493 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA