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Peptide record

TPDB07881

Antibacterial standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB07881
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 15-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
VNFLLHKIYDNIRYS
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C89H135N23O23
ACEQGMPTW
NILY
1895.19
9.56
3
1
8
+1
1.61
-0.127
123.33
Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour
2980
1.57
5
Residue Composition
number
0
A
1
R
2
N
1
D
0
C
0
E
0
Q
0
G
1
H
2
I
2
L
1
K
0
M
1
F
0
P
1
S
0
T
0
W
2
Y
1
V
Amino Acid Distribution
A: 0 R: 1 N: 2 D: 1 C: 0 E: 0 Q: 0 G: 0 H: 1 I: 2 L: 2 K: 1 M: 0 F: 1 P: 0 S: 1 T: 0 W: 0 Y: 2 V: 1
Chemical Descriptors
15 reviewed residue count
C89H135N23O23 sequence-only estimate (linear, free termini)
1895.19 sequence-only estimate (linear, free termini)
9.56 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
1.61 sequence-only estimate (linear, free termini)
-0.127 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA