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Peptide record

TPDB07843

Antibacterial standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB07843
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 15-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
QDNYWVTQGLNILSG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C76H114N20O25
ARCEHKMFP
NQGL
1707.86
3.10
0
1
6
-1
1.08
-0.380
97.33
Mammalian: 0.8 hour Yeast: 10 min E.coli: >10 hour
6990
4.09
7
Residue Composition
number
0
A
0
R
2
N
1
D
0
C
0
E
2
Q
2
G
0
H
1
I
2
L
0
K
0
M
0
F
0
P
1
S
1
T
1
W
1
Y
1
V
Amino Acid Distribution
A: 0 R: 0 N: 2 D: 1 C: 0 E: 0 Q: 2 G: 2 H: 0 I: 1 L: 2 K: 0 M: 0 F: 0 P: 0 S: 1 T: 1 W: 1 Y: 1 V: 1
Chemical Descriptors
15 reviewed residue count
C76H114N20O25 sequence-only estimate (linear, free termini)
1707.86 sequence-only estimate (linear, free termini)
3.10 sequence-only estimate (linear, free termini)
-1 sequence-only estimate (linear, free termini)
1.08 sequence-only estimate (linear, free termini)
-0.380 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA