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Peptide record

TPDB07842

Antibacterial standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB07842
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 15-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
QDNYWVKQGLNKLSK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C82H129N23O24
ARCEHIMFPT
K
1821.07
10.06
3
1
5
+2
2.41
-1.387
71.33
Mammalian: 0.8 hour Yeast: 10 min E.coli: >10 hour
6990
3.84
6
Residue Composition
number
0
A
0
R
2
N
1
D
0
C
0
E
2
Q
1
G
0
H
0
I
2
L
3
K
0
M
0
F
0
P
1
S
0
T
1
W
1
Y
1
V
Amino Acid Distribution
A: 0 R: 0 N: 2 D: 1 C: 0 E: 0 Q: 2 G: 1 H: 0 I: 0 L: 2 K: 3 M: 0 F: 0 P: 0 S: 1 T: 0 W: 1 Y: 1 V: 1
Chemical Descriptors
15 reviewed residue count
C82H129N23O24 sequence-only estimate (linear, free termini)
1821.07 sequence-only estimate (linear, free termini)
10.06 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
2.41 sequence-only estimate (linear, free termini)
-1.387 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA