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Peptide record

TPDB07807

Antibacterial standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB07807
Antibacterial
Anti-infective peptides
AntiBP3 dbAMP DRAMP Peptipedia
standard
No
A 15-aa standard-residue antibacterial peptide sequence curated from AntiBP3, dbAMP, DRAMP, and other sources, with an available 3D structural model.
Sequence
FKCRRWQWRMAKLGA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C88H137N29O17S2
NDEHIPSTYV
R
1937.36
12.13
5
0
7
+5
2.71
-0.827
39.33
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
11000
5.68
2
Residue Composition
number
2
A
3
R
0
N
0
D
1
C
0
E
1
Q
1
G
0
H
0
I
1
L
2
K
1
M
1
F
0
P
0
S
0
T
2
W
0
Y
0
V
Amino Acid Distribution
A: 2 R: 3 N: 0 D: 0 C: 1 E: 0 Q: 1 G: 1 H: 0 I: 0 L: 1 K: 2 M: 1 F: 1 P: 0 S: 0 T: 0 W: 2 Y: 0 V: 0
Chemical Descriptors
15 reviewed residue count
C88H137N29O17S2 sequence-only estimate (linear, free termini)
1937.36 sequence-only estimate (linear, free termini)
12.13 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
2.71 sequence-only estimate (linear, free termini)
-0.827 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.