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Peptide record

TPDB07788

Antibacterial standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB07788
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 15-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
WIQPKTKVIPYVRAL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C88H142N22O19
NDCEGHMFS
IKPV
1812.23
10.72
3
0
8
+3
0.49
0.073
123.33
Mammalian: 2.8 hour Yeast: 3 min E.coli: 2 min
6990
3.86
3
Residue Composition
number
1
A
1
R
0
N
0
D
0
C
0
E
1
Q
0
G
0
H
2
I
1
L
2
K
0
M
0
F
2
P
0
S
1
T
1
W
1
Y
2
V
Amino Acid Distribution
A: 1 R: 1 N: 0 D: 0 C: 0 E: 0 Q: 1 G: 0 H: 0 I: 2 L: 1 K: 2 M: 0 F: 0 P: 2 S: 0 T: 1 W: 1 Y: 1 V: 2
Chemical Descriptors
15 reviewed residue count
C88H142N22O19 sequence-only estimate (linear, free termini)
1812.23 sequence-only estimate (linear, free termini)
10.72 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
0.49 sequence-only estimate (linear, free termini)
0.073 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA