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Peptide record

TPDB07787

Antibacterial standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB07787
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 15-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
WIQPKTKVIPYVAYL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C91H139N19O20
RNDCEGHMFS
IKPYV
1819.22
9.97
2
0
9
+2
-0.50
0.287
123.33
Mammalian: 2.8 hour Yeast: 3 min E.coli: 2 min
8480
4.66
4
Residue Composition
number
1
A
0
R
0
N
0
D
0
C
0
E
1
Q
0
G
0
H
2
I
1
L
2
K
0
M
0
F
2
P
0
S
1
T
1
W
2
Y
2
V
Amino Acid Distribution
A: 1 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 1 G: 0 H: 0 I: 2 L: 1 K: 2 M: 0 F: 0 P: 2 S: 0 T: 1 W: 1 Y: 2 V: 2
Chemical Descriptors
15 reviewed residue count
C91H139N19O20 sequence-only estimate (linear, free termini)
1819.22 sequence-only estimate (linear, free termini)
9.97 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
-0.50 sequence-only estimate (linear, free termini)
0.287 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA