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Peptide record

TPDB07762

Antibacterial standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB07762
Antibacterial
Anti-infective peptides
AntiBP3 dbAMP DRAMP Peptipedia
standard
No
A 15-aa standard-residue antibacterial peptide sequence curated from AntiBP3, dbAMP, DRAMP, and other sources, with an available 3D structural model.
Sequence
RKCLRWQWEMRKVGG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C85H137N29O19S2
ANDHIFPSTY
R
1933.33
11.37
5
1
5
+4
3.27
-1.233
45.33
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
11000
5.69
2
Residue Composition
number
0
A
3
R
0
N
0
D
1
C
1
E
1
Q
2
G
0
H
0
I
1
L
2
K
1
M
0
F
0
P
0
S
0
T
2
W
0
Y
1
V
Amino Acid Distribution
A: 0 R: 3 N: 0 D: 0 C: 1 E: 1 Q: 1 G: 2 H: 0 I: 0 L: 1 K: 2 M: 1 F: 0 P: 0 S: 0 T: 0 W: 2 Y: 0 V: 1
Chemical Descriptors
15 reviewed residue count
C85H137N29O19S2 sequence-only estimate (linear, free termini)
1933.33 sequence-only estimate (linear, free termini)
11.37 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
3.27 sequence-only estimate (linear, free termini)
-1.233 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.