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Peptide record

TPDB07748

Antibacterial standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB07748
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 15-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
SNGPVKKWGSIKGLK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C73H123N21O19
ARDCEQHMFTY
K
1598.91
11.00
4
0
4
+4
1.11
-0.793
71.33
Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour
5500
3.44
3
Residue Composition
number
0
A
0
R
1
N
0
D
0
C
0
E
0
Q
3
G
0
H
1
I
1
L
4
K
0
M
0
F
1
P
2
S
0
T
1
W
0
Y
1
V
Amino Acid Distribution
A: 0 R: 0 N: 1 D: 0 C: 0 E: 0 Q: 0 G: 3 H: 0 I: 1 L: 1 K: 4 M: 0 F: 0 P: 1 S: 2 T: 0 W: 1 Y: 0 V: 1
Chemical Descriptors
15 reviewed residue count
C73H123N21O19 sequence-only estimate (linear, free termini)
1598.91 sequence-only estimate (linear, free termini)
11.00 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
1.11 sequence-only estimate (linear, free termini)
-0.793 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA