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Peptide record

TPDB07747

Antibacterial standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB07747
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 15-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
RNSVRNRVMLWRTKR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C83H146N34O20S1
ADCEQGHIFPY
R
1972.35
13.00
6
0
5
+6
5.45
-1.447
64.67
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
5500
2.79
4
Residue Composition
number
0
A
5
R
2
N
0
D
0
C
0
E
0
Q
0
G
0
H
0
I
1
L
1
K
1
M
0
F
0
P
1
S
1
T
1
W
0
Y
2
V
Amino Acid Distribution
A: 0 R: 5 N: 2 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 0 L: 1 K: 1 M: 1 F: 0 P: 0 S: 1 T: 1 W: 1 Y: 0 V: 2
Chemical Descriptors
15 reviewed residue count
C83H146N34O20S1 sequence-only estimate (linear, free termini)
1972.35 sequence-only estimate (linear, free termini)
13.00 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
5.45 sequence-only estimate (linear, free termini)
-1.447 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA