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Peptide record

TPDB07745

Antibacterial standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB07745
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 15-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
KAKRRARNLNQKKRK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C79H151N35O19
DCEGHIMFPSTWYV
K
1895.29
12.89
9
0
3
+9
6.51
-2.707
39.33
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
0
0.00
3
Residue Composition
number
2
A
4
R
2
N
0
D
0
C
0
E
1
Q
0
G
0
H
0
I
1
L
5
K
0
M
0
F
0
P
0
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 2 R: 4 N: 2 D: 0 C: 0 E: 0 Q: 1 G: 0 H: 0 I: 0 L: 1 K: 5 M: 0 F: 0 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
15 reviewed residue count
C79H151N35O19 sequence-only estimate (linear, free termini)
1895.29 sequence-only estimate (linear, free termini)
12.89 sequence-only estimate (linear, free termini)
+9 sequence-only estimate (linear, free termini)
6.51 sequence-only estimate (linear, free termini)
-2.707 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA