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Peptide record

TPDB07667

Antibacterial standard
14 amino acids
Basic Information
3D PDB MODEL
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TPDB07667
Antibacterial
Anti-infective peptides
AntiBP3
standard
No
A 14-aa standard-residue antibacterial peptide sequence curated from AntiBP3, with an available 3D structural model.
Sequence
CKDDQNPHISCDKF
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C68H104N20O24S2
AREGLMTWYV
D
1649.81
5.19
3
3
2
-1
3.36
-1.329
27.86
Mammalian: 1.2 hour Yeast: >20 hour E.coli: >10 hour
125
0.08
5
Residue Composition
number
0
A
0
R
1
N
3
D
2
C
0
E
1
Q
0
G
1
H
1
I
0
L
2
K
0
M
1
F
1
P
1
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 0 N: 1 D: 3 C: 2 E: 0 Q: 1 G: 0 H: 1 I: 1 L: 0 K: 2 M: 0 F: 1 P: 1 S: 1 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
14 reviewed residue count
C68H104N20O24S2 sequence-only estimate (linear, free termini)
1649.81 sequence-only estimate (linear, free termini)
5.19 sequence-only estimate (linear, free termini)
-1 sequence-only estimate (linear, free termini)
3.36 sequence-only estimate (linear, free termini)
-1.329 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA