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Peptide record

TPDB07481

Antibacterial standard
14 amino acids
Basic Information
3D PDB MODEL
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TPDB07481
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 14-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
VPYPQRDMPIQAFL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C78H119N19O20S1
NCEGHKSTW
P
1674.98
6.71
1
1
7
-0
0.99
-0.150
83.57
Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour
1490
0.89
3
Residue Composition
number
1
A
1
R
0
N
1
D
0
C
0
E
2
Q
0
G
0
H
1
I
1
L
0
K
1
M
1
F
3
P
0
S
0
T
0
W
1
Y
1
V
Amino Acid Distribution
A: 1 R: 1 N: 0 D: 1 C: 0 E: 0 Q: 2 G: 0 H: 0 I: 1 L: 1 K: 0 M: 1 F: 1 P: 3 S: 0 T: 0 W: 0 Y: 1 V: 1
Chemical Descriptors
14 reviewed residue count
C78H119N19O20S1 sequence-only estimate (linear, free termini)
1674.98 sequence-only estimate (linear, free termini)
6.71 sequence-only estimate (linear, free termini)
-0 sequence-only estimate (linear, free termini)
0.99 sequence-only estimate (linear, free termini)
-0.150 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA