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Peptide record

TPDB07410

Antibacterial standard
13 amino acids
Basic Information
3D PDB MODEL
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TPDB07410
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 13-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
VSFNRAVIHSLLG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C64H105N19O17
DCEQKMPTWY
LSV
1412.65
11.05
2
0
7
+1
0.34
0.915
142.31
Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
3
Residue Composition
number
1
A
1
R
1
N
0
D
0
C
0
E
0
Q
1
G
1
H
1
I
2
L
0
K
0
M
1
F
0
P
2
S
0
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 1 R: 1 N: 1 D: 0 C: 0 E: 0 Q: 0 G: 1 H: 1 I: 1 L: 2 K: 0 M: 0 F: 1 P: 0 S: 2 T: 0 W: 0 Y: 0 V: 2
Chemical Descriptors
13 reviewed residue count
C64H105N19O17 sequence-only estimate (linear, free termini)
1412.65 sequence-only estimate (linear, free termini)
11.05 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
0.34 sequence-only estimate (linear, free termini)
0.915 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA