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Peptide record

TPDB07111

Antibacterial standard
13 amino acids
Basic Information
3D PDB MODEL
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TPDB07111
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 13-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
GWGSFFKKAAHVG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C67H94N18O15
RNDCEQILMPTY
G
1391.60
10.60
3
0
6
+2
0.03
-0.038
37.69
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
5500
3.95
1
Residue Composition
number
2
A
0
R
0
N
0
D
0
C
0
E
0
Q
3
G
1
H
0
I
0
L
2
K
0
M
2
F
0
P
1
S
0
T
1
W
0
Y
1
V
Amino Acid Distribution
A: 2 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 3 H: 1 I: 0 L: 0 K: 2 M: 0 F: 2 P: 0 S: 1 T: 0 W: 1 Y: 0 V: 1
Chemical Descriptors
13 reviewed residue count
C67H94N18O15 sequence-only estimate (linear, free termini)
1391.60 sequence-only estimate (linear, free termini)
10.60 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
0.03 sequence-only estimate (linear, free termini)
-0.038 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA