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Peptide record

TPDB07096

Antibacterial standard
13 amino acids
Basic Information
3D PDB MODEL
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TPDB07096
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 13-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
FLSFPTTKTYFPH
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C79H108N16O19
ARNDCEQGIMWV
FT
1585.82
9.74
2
0
5
+1
0.58
-0.177
30.00
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
1490
0.94
5
Residue Composition
number
0
A
0
R
0
N
0
D
0
C
0
E
0
Q
0
G
1
H
0
I
1
L
1
K
0
M
3
F
2
P
1
S
3
T
0
W
1
Y
0
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 1 I: 0 L: 1 K: 1 M: 0 F: 3 P: 2 S: 1 T: 3 W: 0 Y: 1 V: 0
Chemical Descriptors
13 reviewed residue count
C79H108N16O19 sequence-only estimate (linear, free termini)
1585.82 sequence-only estimate (linear, free termini)
9.74 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
0.58 sequence-only estimate (linear, free termini)
-0.177 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA