Back to search

Peptide record

TPDB07056

Antibacterial standard
13 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB07056
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 13-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
WHWTWLPKKKRKV
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C89H133N25O15
ANDCEQGIMFSY
K
1793.19
11.80
6
0
5
+5
2.18
-1.562
52.31
Mammalian: 2.8 hour Yeast: 3 min E.coli: 2 min
16500
9.20
1
Residue Composition
number
0
A
1
R
0
N
0
D
0
C
0
E
0
Q
0
G
1
H
0
I
1
L
4
K
0
M
0
F
1
P
0
S
1
T
3
W
0
Y
1
V
Amino Acid Distribution
A: 0 R: 1 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 1 I: 0 L: 1 K: 4 M: 0 F: 0 P: 1 S: 0 T: 1 W: 3 Y: 0 V: 1
Chemical Descriptors
13 reviewed residue count
C89H133N25O15 sequence-only estimate (linear, free termini)
1793.19 sequence-only estimate (linear, free termini)
11.80 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
2.18 sequence-only estimate (linear, free termini)
-1.562 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA