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Peptide record

TPDB07049

Antibacterial standard
13 amino acids
Basic Information
3D PDB MODEL
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TPDB07049
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 13-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
RRIRPRPPRLPRP
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C73H131N31O14
ANDCEQGHKMFSTWYV
R
1667.04
13.10
6
0
2
+6
6.13
-2.054
60.00
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
0
0.00
0
Residue Composition
number
0
A
6
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
1
I
1
L
0
K
0
M
0
F
5
P
0
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 6 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 1 L: 1 K: 0 M: 0 F: 0 P: 5 S: 0 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
13 reviewed residue count
C73H131N31O14 sequence-only estimate (linear, free termini)
1667.04 sequence-only estimate (linear, free termini)
13.10 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
6.13 sequence-only estimate (linear, free termini)
-2.054 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA