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Peptide record

TPDB07048

Antibacterial standard
13 amino acids
Basic Information
3D PDB MODEL
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TPDB07048
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 13-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
RRGWLALRLVLAY
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C75H123N23O15
NDCEQHIKMFPST
L
1586.95
12.11
3
0
9
+3
1.10
0.531
157.69
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
6990
4.40
1
Residue Composition
number
2
A
3
R
0
N
0
D
0
C
0
E
0
Q
1
G
0
H
0
I
4
L
0
K
0
M
0
F
0
P
0
S
0
T
1
W
1
Y
1
V
Amino Acid Distribution
A: 2 R: 3 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 1 H: 0 I: 0 L: 4 K: 0 M: 0 F: 0 P: 0 S: 0 T: 0 W: 1 Y: 1 V: 1
Chemical Descriptors
13 reviewed residue count
C75H123N23O15 sequence-only estimate (linear, free termini)
1586.95 sequence-only estimate (linear, free termini)
12.11 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
1.10 sequence-only estimate (linear, free termini)
0.531 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA