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Peptide record

TPDB06938

Antibacterial standard
13 amino acids
Basic Information
3D PDB MODEL
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TPDB06938
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 13-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
KKTSMKIIPFTRL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C72H127N19O17S1
ANDCEQGHWYV
K
1562.98
11.73
4
0
5
+4
1.54
-0.192
90.00
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
0
0.00
3
Residue Composition
number
0
A
1
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
2
I
1
L
3
K
1
M
1
F
1
P
1
S
2
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 1 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 2 L: 1 K: 3 M: 1 F: 1 P: 1 S: 1 T: 2 W: 0 Y: 0 V: 0
Chemical Descriptors
13 reviewed residue count
C72H127N19O17S1 sequence-only estimate (linear, free termini)
1562.98 sequence-only estimate (linear, free termini)
11.73 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
1.54 sequence-only estimate (linear, free termini)
-0.192 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA