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Peptide record

TPDB06841

Antibacterial standard
12 amino acids
Basic Information
3D PDB MODEL
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TPDB06841
Antibacterial
Anti-infective peptides
AntiBP3
standard
No
A 12-aa standard-residue antibacterial peptide sequence curated from AntiBP3, with an available 3D structural model.
Sequence
IQPKTKVIPYVR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C68H116N18O16
ANDCEGHLMFSW
IKPV
1441.78
10.72
3
0
5
+3
1.36
-0.300
113.33
Mammalian: 20 hour Yeast: 30 min E.coli: >10 hour
1490
1.03
3
Residue Composition
number
0
A
1
R
0
N
0
D
0
C
0
E
1
Q
0
G
0
H
2
I
0
L
2
K
0
M
0
F
2
P
0
S
1
T
0
W
1
Y
2
V
Amino Acid Distribution
A: 0 R: 1 N: 0 D: 0 C: 0 E: 0 Q: 1 G: 0 H: 0 I: 2 L: 0 K: 2 M: 0 F: 0 P: 2 S: 0 T: 1 W: 0 Y: 1 V: 2
Chemical Descriptors
12 reviewed residue count
C68H116N18O16 sequence-only estimate (linear, free termini)
1441.78 sequence-only estimate (linear, free termini)
10.72 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
1.36 sequence-only estimate (linear, free termini)
-0.300 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA