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Peptide record

TPDB06643

Antibacterial standard
12 amino acids
Basic Information
3D PDB MODEL
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TPDB06643
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 12-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
ECVYYKGRMWCP
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C69H99N17O17S3
ANDQHILFST
CY
1534.83
8.27
2
1
5
+1
1.28
-0.525
24.17
Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour
8605
5.61
4
Residue Composition
number
0
A
1
R
0
N
0
D
2
C
1
E
0
Q
1
G
0
H
0
I
0
L
1
K
1
M
0
F
1
P
0
S
0
T
1
W
2
Y
1
V
Amino Acid Distribution
A: 0 R: 1 N: 0 D: 0 C: 2 E: 1 Q: 0 G: 1 H: 0 I: 0 L: 0 K: 1 M: 1 F: 0 P: 1 S: 0 T: 0 W: 1 Y: 2 V: 1
Chemical Descriptors
12 reviewed residue count
C69H99N17O17S3 sequence-only estimate (linear, free termini)
1534.83 sequence-only estimate (linear, free termini)
8.27 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
1.28 sequence-only estimate (linear, free termini)
-0.525 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA