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Peptide record

TPDB06571

Antibacterial standard
12 amino acids
Basic Information
3D PDB MODEL
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TPDB06571
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 12-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
YVLFKRKRFIFI
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C83H128N20O14
ANDCEQGHMPSTW
F
1630.06
11.51
4
0
8
+4
1.11
0.608
121.67
Mammalian: 2.8 hour Yeast: 10 min E.coli: 2 min
1490
0.91
1
Residue Composition
number
0
A
2
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
2
I
1
L
2
K
0
M
3
F
0
P
0
S
0
T
0
W
1
Y
1
V
Amino Acid Distribution
A: 0 R: 2 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 2 L: 1 K: 2 M: 0 F: 3 P: 0 S: 0 T: 0 W: 0 Y: 1 V: 1
Chemical Descriptors
12 reviewed residue count
C83H128N20O14 sequence-only estimate (linear, free termini)
1630.06 sequence-only estimate (linear, free termini)
11.51 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
1.11 sequence-only estimate (linear, free termini)
0.608 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA