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Peptide record

TPDB06565

Antibacterial standard
12 amino acids
Basic Information
3D PDB MODEL
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TPDB06565
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 12-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
WKLFLKAVKKLL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C76H127N17O13
RNDCEQGHIMPSTY
LK
1486.95
11.00
4
0
8
+4
-0.72
0.625
162.50
Mammalian: 2.8 hour Yeast: 3 min E.coli: 2 min
5500
3.70
0
Residue Composition
number
1
A
0
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
0
I
4
L
4
K
0
M
1
F
0
P
0
S
0
T
1
W
0
Y
1
V
Amino Acid Distribution
A: 1 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 0 L: 4 K: 4 M: 0 F: 1 P: 0 S: 0 T: 0 W: 1 Y: 0 V: 1
Chemical Descriptors
12 reviewed residue count
C76H127N17O13 sequence-only estimate (linear, free termini)
1486.95 sequence-only estimate (linear, free termini)
11.00 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
-0.72 sequence-only estimate (linear, free termini)
0.625 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA