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Peptide record

TPDB06379

Antibacterial standard
11 amino acids
Basic Information
3D PDB MODEL
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TPDB06379
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 11-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
FKKFWKWFRRF
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C88H118N22O12
ANDCEQGHILMPSTYV
F
1676.05
12.43
5
0
6
+5
2.72
-1.027
0.00
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
11000
6.56
0
Residue Composition
number
0
A
2
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
0
I
0
L
3
K
0
M
4
F
0
P
0
S
0
T
2
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 2 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 0 L: 0 K: 3 M: 0 F: 4 P: 0 S: 0 T: 0 W: 2 Y: 0 V: 0
Chemical Descriptors
11 reviewed residue count
C88H118N22O12 sequence-only estimate (linear, free termini)
1676.05 sequence-only estimate (linear, free termini)
12.43 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
2.72 sequence-only estimate (linear, free termini)
-1.027 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA