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Peptide record

TPDB06273

Antibacterial standard
11 amino acids
Basic Information
3D PDB MODEL
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TPDB06273
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 11-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
VNFKLLSHSLL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C60H99N15O15
ARDCEQGIMPTWY
L
1270.54
10.10
2
0
6
+1
-0.28
0.909
168.18
Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
3
Residue Composition
number
0
A
0
R
1
N
0
D
0
C
0
E
0
Q
0
G
1
H
0
I
4
L
1
K
0
M
1
F
0
P
2
S
0
T
0
W
0
Y
1
V
Amino Acid Distribution
A: 0 R: 0 N: 1 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 1 I: 0 L: 4 K: 1 M: 0 F: 1 P: 0 S: 2 T: 0 W: 0 Y: 0 V: 1
Chemical Descriptors
11 reviewed residue count
C60H99N15O15 sequence-only estimate (linear, free termini)
1270.54 sequence-only estimate (linear, free termini)
10.10 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
-0.28 sequence-only estimate (linear, free termini)
0.909 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA