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Peptide record

TPDB06272

Antibacterial standard
11 amino acids
Basic Information
3D PDB MODEL
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TPDB06272
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 11-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
VKSWIRKLVHR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C66H112N22O13
ANDCEQGMFPTY
RKV
1421.76
12.42
5
0
5
+4
2.61
-0.455
123.64
Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour
5500
3.87
1
Residue Composition
number
0
A
2
R
0
N
0
D
0
C
0
E
0
Q
0
G
1
H
1
I
1
L
2
K
0
M
0
F
0
P
1
S
0
T
1
W
0
Y
2
V
Amino Acid Distribution
A: 0 R: 2 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 1 I: 1 L: 1 K: 2 M: 0 F: 0 P: 0 S: 1 T: 0 W: 1 Y: 0 V: 2
Chemical Descriptors
11 reviewed residue count
C66H112N22O13 sequence-only estimate (linear, free termini)
1421.76 sequence-only estimate (linear, free termini)
12.42 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
2.61 sequence-only estimate (linear, free termini)
-0.455 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA