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Peptide record

TPDB06220

Antibacterial standard
11 amino acids
Basic Information
3D PDB MODEL
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TPDB06220
Antibacterial
Anti-infective peptides
AntiBP3 dbAMP Peptipedia
standard
No
A 11-aa standard-residue antibacterial peptide sequence curated from AntiBP3, dbAMP, and Peptipedia, with an available 3D structural model.
Sequence
CTTCECCCSCS
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C37H63N11O18S6
ARNDQGHILKMFPWYV
C
1142.33
3.29
0
1
0
-1
1.01
0.773
0.00
Mammalian: 1.2 hour Yeast: >20 hour E.coli: >10 hour
375
0.33
10
Residue Composition
number
0
A
0
R
0
N
0
D
6
C
1
E
0
Q
0
G
0
H
0
I
0
L
0
K
0
M
0
F
0
P
2
S
2
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 0 C: 6 E: 1 Q: 0 G: 0 H: 0 I: 0 L: 0 K: 0 M: 0 F: 0 P: 0 S: 2 T: 2 W: 0 Y: 0 V: 0
Chemical Descriptors
11 reviewed residue count
C37H63N11O18S6 sequence-only estimate (linear, free termini)
1142.33 sequence-only estimate (linear, free termini)
3.29 sequence-only estimate (linear, free termini)
-1 sequence-only estimate (linear, free termini)
1.01 sequence-only estimate (linear, free termini)
0.773 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.