Back to search

Peptide record

TPDB06211

Antibacterial standard
11 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB06211
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 11-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
KSDVRRWRSRY
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C65H105N25O17
ANCEQGHILMFPT
R
1508.71
11.95
5
1
3
+4
6.77
-2.273
26.36
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
6990
4.63
3
Residue Composition
number
0
A
4
R
0
N
1
D
0
C
0
E
0
Q
0
G
0
H
0
I
0
L
1
K
0
M
0
F
0
P
2
S
0
T
1
W
1
Y
1
V
Amino Acid Distribution
A: 0 R: 4 N: 0 D: 1 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 0 L: 0 K: 1 M: 0 F: 0 P: 0 S: 2 T: 0 W: 1 Y: 1 V: 1
Chemical Descriptors
11 reviewed residue count
C65H105N25O17 sequence-only estimate (linear, free termini)
1508.71 sequence-only estimate (linear, free termini)
11.95 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
6.77 sequence-only estimate (linear, free termini)
-2.273 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA