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Peptide record

TPDB06123

Antibacterial standard
10 amino acids
Basic Information
3D PDB MODEL
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TPDB06123
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 10-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
FKARRWQWRM
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C68H101N23O12S1
NDCEGHILPSTYV
R
1464.76
12.71
4
0
5
+4
4.41
-1.620
10.00
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
11000
7.51
1
Residue Composition
number
1
A
3
R
0
N
0
D
0
C
0
E
1
Q
0
G
0
H
0
I
0
L
1
K
1
M
1
F
0
P
0
S
0
T
2
W
0
Y
0
V
Amino Acid Distribution
A: 1 R: 3 N: 0 D: 0 C: 0 E: 0 Q: 1 G: 0 H: 0 I: 0 L: 0 K: 1 M: 1 F: 1 P: 0 S: 0 T: 0 W: 2 Y: 0 V: 0
Chemical Descriptors
10 reviewed residue count
C68H101N23O12S1 sequence-only estimate (linear, free termini)
1464.76 sequence-only estimate (linear, free termini)
12.71 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
4.41 sequence-only estimate (linear, free termini)
-1.620 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA