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Peptide record

TPDB06087

Antibacterial standard
10 amino acids
Basic Information
3D PDB MODEL
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TPDB06087
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 10-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
AARCLSQRRK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C47H89N21O13S1
NDEGHIMFPTWYV
R
1188.42
12.12
4
0
3
+4
4.94
-1.180
59.00
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
3
Residue Composition
number
2
A
3
R
0
N
0
D
1
C
0
E
1
Q
0
G
0
H
0
I
1
L
1
K
0
M
0
F
0
P
1
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 2 R: 3 N: 0 D: 0 C: 1 E: 0 Q: 1 G: 0 H: 0 I: 0 L: 1 K: 1 M: 0 F: 0 P: 0 S: 1 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
10 reviewed residue count
C47H89N21O13S1 sequence-only estimate (linear, free termini)
1188.42 sequence-only estimate (linear, free termini)
12.12 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
4.94 sequence-only estimate (linear, free termini)
-1.180 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA