Back to search

Peptide record

TPDB06086

Antibacterial standard
10 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB06086
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 10-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
AANCLSLGKA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C39H70N12O13S1
RDEQHIMFPTWYV
A
947.12
8.97
1
0
5
+1
-0.19
0.690
108.00
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
3
Residue Composition
number
3
A
0
R
1
N
0
D
1
C
0
E
0
Q
1
G
0
H
0
I
2
L
1
K
0
M
0
F
0
P
1
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 3 R: 0 N: 1 D: 0 C: 1 E: 0 Q: 0 G: 1 H: 0 I: 0 L: 2 K: 1 M: 0 F: 0 P: 0 S: 1 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
10 reviewed residue count
C39H70N12O13S1 sequence-only estimate (linear, free termini)
947.12 sequence-only estimate (linear, free termini)
8.97 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
-0.19 sequence-only estimate (linear, free termini)
0.690 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA