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Peptide record

TPDB06083

Antibacterial standard
10 amino acids
Basic Information
3D PDB MODEL
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TPDB06083
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 10-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
AAHCLLKRKR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C51H94N20O11S1
NDEQGIMFPSTWYV
ARLK
1195.49
11.47
5
0
4
+4
3.09
-0.630
98.00
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
1
Residue Composition
number
2
A
2
R
0
N
0
D
1
C
0
E
0
Q
0
G
1
H
0
I
2
L
2
K
0
M
0
F
0
P
0
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 2 R: 2 N: 0 D: 0 C: 1 E: 0 Q: 0 G: 0 H: 1 I: 0 L: 2 K: 2 M: 0 F: 0 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
10 reviewed residue count
C51H94N20O11S1 sequence-only estimate (linear, free termini)
1195.49 sequence-only estimate (linear, free termini)
11.47 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
3.09 sequence-only estimate (linear, free termini)
-0.630 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA