Back to search

Peptide record

TPDB06020

Antibacterial standard
10 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB06020
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 10-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
LGYLEQLLRL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C57H96N14O15
ANDCHIKMFPSTWV
L
1217.47
6.90
1
1
6
-0
0.19
0.580
195.00
Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min
1490
1.22
2
Residue Composition
number
0
A
1
R
0
N
0
D
0
C
1
E
1
Q
1
G
0
H
0
I
5
L
0
K
0
M
0
F
0
P
0
S
0
T
0
W
1
Y
0
V
Amino Acid Distribution
A: 0 R: 1 N: 0 D: 0 C: 0 E: 1 Q: 1 G: 1 H: 0 I: 0 L: 5 K: 0 M: 0 F: 0 P: 0 S: 0 T: 0 W: 0 Y: 1 V: 0
Chemical Descriptors
10 reviewed residue count
C57H96N14O15 sequence-only estimate (linear, free termini)
1217.47 sequence-only estimate (linear, free termini)
6.90 sequence-only estimate (linear, free termini)
-0 sequence-only estimate (linear, free termini)
0.19 sequence-only estimate (linear, free termini)
0.580 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA